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#1 2023-02-02 15:44:30
- m_golbs
- Member
- From: Germany
- Registered: 2009-11-09
- Posts: 137
su sudo root access for example to edit asrun in salome sif container?
Hello,
how can I get root access in salome sif container system for example to edit asrun? What is the default keyword?
Greeting
The superfluous chase, is to miss the essential.
Jules Saliège
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#2 2023-02-02 16:01:59
- jeanpierreaubry
- Guru
- From: nantes (france)
- Registered: 2009-03-12
- Posts: 3,975
Re: su sudo root access for example to edit asrun in salome sif container?
hello
why not building a sand box from the container
you then have full access to everything as regular user
once this done astk and as_run seem to open much faster
on the other hand i am very curious to know what you would edit in as_run
jean pierre aubry
consider reading my book
freely available here https://framabook.org/beginning-with-code_aster/
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#3 2023-02-02 16:16:17
- m_golbs
- Member
- From: Germany
- Registered: 2009-11-09
- Posts: 137
Re: su sudo root access for example to edit asrun in salome sif container?
Hello Mr. Aubry,
"a sand box from the container" Is this for a conventional people possible?
In asrun I want edit first $tmp to our NFS System outside sif container.
But my favorite way to get Code-Aster 15.5 which looks like in good old day's before 2020. A setup.py in a Debian or Ubuntu System, no sif, not other way's..
Greeting Markus
Last edited by m_golbs (2023-02-02 16:20:55)
The superfluous chase, is to miss the essential.
Jules Saliège
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#4 2023-02-02 16:23:22
- jeanpierreaubry
- Guru
- From: nantes (france)
- Registered: 2009-03-12
- Posts: 3,975
Re: su sudo root access for example to edit asrun in salome sif container?
it is possible
i did it that way and it worked
singularity build --sandbox your_container_sandbox your_container.sif
singularity exec [options] your_container_sandbox
according to instrutions found here
https: [double slash 3w] .nas.nasa.gov/hecc/support/kb/best-practices-for-running-singularity-on-nas-systems_659.html
cant this tmp change be specified in the .export file ?
consider reading my book
freely available here https://framabook.org/beginning-with-code_aster/
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#5 2023-02-02 16:37:37
- m_golbs
- Member
- From: Germany
- Registered: 2009-11-09
- Posts: 137
Re: su sudo root access for example to edit asrun in salome sif container?
Hello Mr. Aubry,
many thanks! But the old way to compile a code-aster from source is also possible? I don't need the salome system in the same "container".
"cant this tmp change be specified in the .export file ?" I think, yes. But I like basic asrun configurations.
Greeting Markus
The superfluous chase, is to miss the essential.
Jules Saliège
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#6 2023-02-02 17:01:52
- jeanpierreaubry
- Guru
- From: nantes (france)
- Registered: 2009-03-12
- Posts: 3,975
Re: su sudo root access for example to edit asrun in salome sif container?
But the old way to compile a code-aster from source is also possible?.
i dot not think this is possible
I don't need the salome system in the same "container".
neither do i!!
this all salome-meca containerized way of doing things is
a pain in the neck
i struggle more with that than with an old style way
consider reading my book
freely available here https://framabook.org/beginning-with-code_aster/
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#7 2023-02-02 17:26:37
- m_golbs
- Member
- From: Germany
- Registered: 2009-11-09
- Posts: 137
Re: su sudo root access for example to edit asrun in salome sif container?
Hello Mr. Aubry,
I want solve numerical problems, but this time (since 2021) I work for more then 99% of the time on container, systems,.., and so on. It is a great catastrophe! In 2009 I start with Code-Aster. To 2020 was Code-Aster a good FEM System for me. I think, I will bury Code-Aster use after 14 years next days. The last chance that I have is our HPC specialist. He compile Code-Aster 15.05 for our HPC system. I will ask him, if it possible to compile a 15.05 for my Debian or Ubuntu wortkstation.
Greeting Markus
The superfluous chase, is to miss the essential.
Jules Saliège
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#8 2023-02-03 09:57:17
- jeanpierreaubry
- Guru
- From: nantes (france)
- Registered: 2009-03-12
- Posts: 3,975
Re: su sudo root access for example to edit asrun in salome sif container?
The last chance that I have is our HPC specialist. He compile Code-Aster 15.05 for our HPC system. I will ask him, if it possible to compile a 15.05 for my Debian or Ubuntu wortkstation.
i suppose you mean version 15.5
whatever it is if you found out a way to build a stand alone version of code_aster the old way (not in a container) i had like to know it
consider reading my book
freely available here https://framabook.org/beginning-with-code_aster/
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#9 2023-02-13 11:53:19
- m_golbs
- Member
- From: Germany
- Registered: 2009-11-09
- Posts: 137
Re: su sudo root access for example to edit asrun in salome sif container?
Hello Mr. Aubry,
that is a little bit difficult.
║ La base GLOBALE a été constituée avec la version 15.05.00 ║
║ et vous utilisez la version 15.06.00 Here the listings:
HPC Output:
<INFO> Demarrage de l'execution.
-- CODE_ASTER -- VERSION : EXPLOITATION (stable) --
-- CODE_ASTER -- VERSION : EXPLOITATION (stable) --
Version 15.5.0 modifiee le 13/05/2022
revision c610c51d7174 - branche 'v15'
Version 15.5.0 modifiee le 13/05/2022
revision c610c51d7174 - branche 'v15'
Copyright EDF R&D 1991 - 2023
Execution du : Tue Jan 3 15:23:25 2023
Nom de la machine : beo-01
Architecture : 64bit
Type de processeur : x86_64
Systeme d'exploitation : Linux-5.4.180-ql-generic-12.0-14-x86_64-with-glibc2.29
Langue des messages : en (UTF-8)
Version de Python : 3.8.10
Version de NumPy : 1.17.4
Copyright EDF R&D 1991 - 2023
Execution du : Tue Jan 3 15:23:25 2023
Nom de la machine : beo-01
Architecture : 64bit
Type de processeur : x86_64
Systeme d'exploitation : Linux-5.4.180-ql-generic-12.0-14-x86_64-with-glibc2.29
Langue des messages : en (UTF-8)
Version de Python : 3.8.10
Version de NumPy : 1.17.4
Parallelisme MPI : actif
Rang du processeur courant : 1
Nombre de processeurs utilises : 8
Parallelisme MPI : actif
Rang du processeur courant : 0
Nombre de processeurs utilises : 8
Parallelisme OpenMP : actif
Nombre de processus utilises : 1
Parallelisme OpenMP : actif
Nombre de processus utilises : 1
Version de la librairie HDF5 : 1.10.5
Version de la librairie HDF5 : 1.10.5
Version de la librairie MED : 4.1.0
Version de la librairie MED : 4.1.0
Librairie MFront : non disponible
Librairie MFront : non disponible
Version de la librairie MUMPS : 5.2.1
Version de la librairie MUMPS : 5.2.1
Librairie PETSc : non disponible
Librairie PETSc : non disponible
Version de la librairie SCOTCH : 6.0.10
Version de la librairie SCOTCH : 6.0.10
SIF Workstation Salome version output:
╔════════════════════════════════════════════════════════════════════════════════════════════════╗
║ <A> <JEVEUX_08> ║
║ ║
║ La base GLOBALE a été constituée avec la version 15.05.00 ║
║ et vous utilisez la version 15.06.00 ║
║ ║
║ Conseil : ║
║ En général, la base ne peut-être utilisée qu'avec la version du code l'ayant construite, ║
║ les catalogues d'éléments sont stockés dans la base lors de sa création, or certaines ║
║ structures de ║
║ données s'appuient sur leur description qui peut varier d'une version à l'autre. ║
║ ║
║ ║
║ Ceci est une alarme. Si vous ne comprenez pas le sens de cette ║
║ alarme, vous pouvez obtenir des résultats inattendus ! ║
╚════════════════════════════════════════════════════════════════════════════════════════════════╝
Greeting Markus
Last edited by m_golbs (2023-02-13 11:54:09)
The superfluous chase, is to miss the essential.
Jules Saliège
Offline
#10 2023-02-13 15:02:46
- jeanpierreaubry
- Guru
- From: nantes (france)
- Registered: 2009-03-12
- Posts: 3,975
Re: su sudo root access for example to edit asrun in salome sif container?
i do not really understand what is your question
but the message looks like you are trying to open with a version of code aster (15.6) a bas that was created with a previous version (15.5)
this is not allowed
consider reading my book
freely available here https://framabook.org/beginning-with-code_aster/
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#11 2023-02-13 15:39:32
- m_golbs
- Member
- From: Germany
- Registered: 2009-11-09
- Posts: 137
Re: su sudo root access for example to edit asrun in salome sif container?
Hello,
"(15.6) a bas that was created with a previous version (15.5) this is not allowed" I skilled. "15.05.00 and 15.06.00 only notations"
The basic question are the root access to the salome_meca_xxxx.sif. But I will to bury sif container.
I will get probably a nativ Code-Aster version 15.5 for Ubuntu 20.04 LTS, an install script and deb files, from our HPC specialist. So I can install simple Code-Aster on every 20.04 LTS Workstation, no more sif... Its so simple how in old days... When this works, every can use this...
Greeting Markus
2023-02-15 from our HPC specialist receive:
aster-15.5-opse-openmpi-gcc-4.0-bin_15.5.0-ql.1+12-focal_amd64.deb
astk-common-2021-opse_2021.0-ql.1+12-focal_amd64.deb
codeaster-run-2021-opse_2021.0-ql.1+12-focal_amd64.deb
libhdf5-1.10-opse-openmpi-gcc-4.0_1.10.5-ql.3+12-focal_amd64.deb
libmed-4.1-opse-openmpi-gcc-4.0_4.1.0-ql.1+12-focal_amd64.deb
libmetis-5.1-opse-gcc_5.1.0-ql.5+12-focal_amd64.deb
libparmetis-4.0-opse-openmpi-gcc-4.0_4.0.3-ql.6+12-focal_amd64.deb
libptscotch-6.0-opse-openmpi-gcc-4.0_6.0.10-ql.1+12-focal_amd64.deb
libscalapack-2.2-opse-openmpi-gcc-4.0_2.2.0-ql.1+12-focal_amd64.deb
libscotch-6.0-opse-gcc_6.0.10-ql.1+12-focal_amd64.debI will test this...
Hello,
our HPC specialist has managed (I didn't have time to test, that's why it took so long) to build a Code-Aster 15.5 version natively without containers. It is Code-Aster MPI without sif and without Salome & Co. It now runs on a normal Ubuntu 20.04 workstation version. Only package sources have to be included and the 20MB Code-Aster binary files have to be loaded.
Greetings Markus
Last edited by m_golbs (2023-05-03 15:53:13)
The superfluous chase, is to miss the essential.
Jules Saliège
Offline
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